STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ28473.1Por secretion system C-terminal sorting domain-containing protein. (1610 aa)    
Predicted Functional Partners:
SDJ28510.1
Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
  
 
   0.617
SDJ28437.1
Alginate lyase.
 
   
0.589
SDJ28309.1
Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
  
 
   0.570
SDJ28619.1
Starch-binding associating with outer membrane.
  
     0.510
SDI64760.1
Putative collagen-binding domain of a collagenase.
  
 
   0.487
SDI61295.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
  0.458
SDJ28665.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.458
SDI51719.1
Carbohydrate binding domain-containing protein.
  
     0.454
SDI65363.1
alpha-L-rhamnosidase.
  
     0.447
SDJ56548.1
Hypothetical protein.
  
     0.434
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
Server load: low (22%) [HD]