STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ29715.14-carboxymuconolactone decarboxylase. (419 aa)    
Predicted Functional Partners:
SDJ29681.1
Uncharacterized zinc-type alcohol dehydrogenase-like protein.
 
    0.791
SDJ31478.1
3-oxoacid CoA-transferase.
  
 
 0.729
SDJ29981.1
Aldo/keto reductase.
 
    0.681
SDJ29643.1
Hypothetical protein.
       0.653
SDJ31599.1
3-carboxy-cis,cis-muconate cycloisomerase.
  
 
 0.642
SDJ29839.1
Predicted oxidoreductase.
 
     0.615
SDJ29946.1
Predicted oxidoreductase.
 
     0.593
SDJ31560.1
4-carboxymuconolactone decarboxylase.
     
  0.565
SDJ29751.1
Modulator of drug activity B.
       0.476
SDJ29911.1
Protein of unknown function.
   
  0.473
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.