close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ31644.1Protocatechuate 3,4-dioxygenase, alpha subunit. (178 aa)    
Predicted Functional Partners:
pcaH
Protocatechuate 3,4-dioxygenase, beta subunit.
 
  
  0.996
SDJ31599.1
3-carboxy-cis,cis-muconate cycloisomerase.
 
 
 0.966
SDJ31560.1
4-carboxymuconolactone decarboxylase.
 
 
 0.943
pobA
P-hydroxybenzoate 3-monooxygenase.
 
  
 0.916
SDJ31478.1
3-oxoacid CoA-transferase.
 
 
 0.820
SDJ31733.1
Transcriptional regulator, AraC family.
 
     0.809
SDJ32577.1
Catechol 2,3-dioxygenase.
  
  
 0.787
SDJ32671.1
2-polyprenyl-6-methoxyphenol hydroxylase.
 
  
 0.652
paaE
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 
 0.532
SDI66557.1
Dioxygenase.
  
  
  0.450
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.