STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ31870.1Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. (375 aa)    
Predicted Functional Partners:
SDI53309.1
Arylsulfatase A.
  
 
   0.822
SDJ27301.1
Arylsulfatase A.
  
 
   0.789
SDJ31780.1
Arylsulfatase A.
 
 
   0.787
SDJ00628.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
  
     0.492
SDJ31912.1
Beta-glucosidase.
       0.441
SDJ31823.1
Hypothetical protein.
       0.420
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.