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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ32244.1Predicted arabinose efflux permease, MFS family; Manually curated. (410 aa)    
Predicted Functional Partners:
SDJ32577.1
Catechol 2,3-dioxygenase.
 
     0.712
SDJ32629.1
Alpha/beta hydrolase of unknown function; Belongs to the UPF0255 family.
 
    0.687
SDJ32671.1
2-polyprenyl-6-methoxyphenol hydroxylase.
 
     0.660
SDJ32205.1
TonB-dependent Receptor Plug Domain.
 
    0.658
SDJ32290.1
Broad-specificity cellobiase; Belongs to the glycosyl hydrolase 1 family.
       0.636
SDJ32078.1
Kynurenine formamidase.
  
     0.630
SDJ95810.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
     
 0.530
SDJ31560.1
4-carboxymuconolactone decarboxylase.
 
     0.519
SDJ32372.1
Acetyl esterase/lipase.
 
     0.490
SDJ32494.1
Cupin domain-containing protein.
 
     0.448
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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