STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ32290.1Broad-specificity cellobiase; Belongs to the glycosyl hydrolase 1 family. (480 aa)    
Predicted Functional Partners:
manA
Mannose-6-phosphate isomerase, type 1.
 
 0.933
SDJ32331.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
    
  0.700
SDJ32244.1
Predicted arabinose efflux permease, MFS family; Manually curated.
       0.636
rpiB
Ribose 5-phosphate isomerase B.
  
 
 0.617
SDJ78509.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
 
 0.604
SDI80182.1
alpha-D-xyloside xylohydrolase; Belongs to the glycosyl hydrolase 31 family.
  
 0.552
SDJ64698.1
alpha-D-xyloside xylohydrolase; Belongs to the glycosyl hydrolase 31 family.
  
 0.552
SDJ32372.1
Acetyl esterase/lipase.
    
 0.550
SDJ52188.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
    
  0.527
SDJ32414.1
alpha-N-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.510
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.