STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ33414.1L-rhamnose-H+ transport protein. (356 aa)    
Predicted Functional Partners:
SDJ33365.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
 
     0.823
SDJ33454.1
Regulatory protein, gntR family.
 
     0.795
SDJ33206.1
Sugar (pentulose or hexulose) kinase.
 
  
 0.784
rhaM
L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose.
 
   
 0.721
SDJ32158.1
Glycosyl hydrolases family 2, sugar binding domain.
 
     0.679
SDJ33250.1
L-rhamnose isomerase / sugar isomerase.
 
     0.677
SDI84466.1
Alpha-L-rhamnosidase N-terminal domain-containing protein.
  
     0.545
SDI53988.1
Transcriptional regulator, GntR family.
 
     0.505
SDI53150.1
DNA-binding transcriptional regulator YhcF, GntR family.
 
     0.503
SDI65204.1
alpha-L-rhamnosidase.
 
     0.487
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.