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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ33454.1Regulatory protein, gntR family. (343 aa)    
Predicted Functional Partners:
SDJ33206.1
Sugar (pentulose or hexulose) kinase.
 
 
 
 0.869
gltA
Glutamate synthase (NADH) large subunit.
   
 
 0.820
SDJ33365.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
 
   0.817
SDJ33414.1
L-rhamnose-H+ transport protein.
 
     0.795
SDJ33250.1
L-rhamnose isomerase / sugar isomerase.
 
     0.756
SDI94336.1
AraC family transcriptional regulator; ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain.
  
 0.656
SDI94629.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
  
 0.656
SDJ29042.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
  
 0.656
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
   
 
 0.645
prsA
Ribose-phosphate pyrophosphokinase.
   
 0.606
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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