STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ40089.1Gliding motility-associated C-terminal domain-containing protein. (881 aa)    
Predicted Functional Partners:
porP
Type IX secretion system membrane protein, PorP/SprF family.
 
     0.909
SDJ40003.1
WD40-like Beta Propeller Repeat.
 
 
   0.846
SDI74717.1
Hypothetical protein.
  
     0.675
SDI71600.1
Tetratricopeptide repeat-containing protein.
  
     0.663
SDJ66853.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.623
SDJ07697.1
Hypothetical protein.
  
     0.596
SDK06280.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
     0.566
SDI63056.1
Tetratricopeptide repeat-containing protein.
  
 
   0.554
SDI73697.1
Hypothetical protein.
  
  
  0.531
SDI82086.1
Protein of unknown function.
  
     0.524
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.