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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gldFProtein involved in gliding motility GldF. (241 aa)    
Predicted Functional Partners:
gldG
Protein involved in gliding motility GldG.
  
 0.996
gldA
Protein involved in gliding motility GldA.
 
 0.972
SDJ12064.1
ABC-2 type transport system ATP-binding protein.
  
 0.885
SDJ12097.1
ABC-type multidrug transport system, ATPase component.
  
 0.885
fjo14
Hypothetical protein.
 
     0.754
gldD
Protein involved in gliding motility GldD.
  
   
 0.677
dnaN
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
    0.622
phoH
Phosphate starvation-inducible protein PhoH.
 
     0.590
SDJ58147.1
Protein involved in gliding motility GldJ.
  
   
 0.514
gldB
Protein involved in gliding motility GldB.
  
   
 0.503
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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