Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDJ29793.1 | SDJ42099.1 | SAMN05192550_1845 | SAMN05192550_2060 | AraC-type DNA-binding protein. | Transcriptional regulator, AraC family. | 0.498 |
SDJ42058.1 | SDJ42099.1 | SAMN05192550_2059 | SAMN05192550_2060 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Transcriptional regulator, AraC family. | 0.539 |
SDJ42058.1 | uxuA-2 | SAMN05192550_2059 | SAMN05192550_2058 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | 0.932 |
SDJ42099.1 | SDJ29793.1 | SAMN05192550_2060 | SAMN05192550_1845 | Transcriptional regulator, AraC family. | AraC-type DNA-binding protein. | 0.498 |
SDJ42099.1 | SDJ42058.1 | SAMN05192550_2060 | SAMN05192550_2059 | Transcriptional regulator, AraC family. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.539 |
SDJ42099.1 | uxuA-2 | SAMN05192550_2060 | SAMN05192550_2058 | Transcriptional regulator, AraC family. | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | 0.532 |
uxuA-2 | SDJ42058.1 | SAMN05192550_2058 | SAMN05192550_2059 | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.932 |
uxuA-2 | SDJ42099.1 | SAMN05192550_2058 | SAMN05192550_2060 | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | Transcriptional regulator, AraC family. | 0.532 |