STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ42586.1Peptidase family M28. (325 aa)    
Predicted Functional Partners:
SDI51270.1
Dipeptidyl-peptidase-4.
  
    0.637
SDJ42670.1
Predicted neuraminidase (sialidase).
 
     0.636
SDJ42631.1
L-rhamnose mutarotase.
       0.608
dpp4
Dipeptidyl-peptidase-4.
  
    0.554
SDJ40301.1
Hypothetical protein.
  
 
  0.510
SDI74494.1
Peptidase family M1.
  
 
  0.485
SDI51233.1
Proton-dependent oligopeptide transporter, POT family.
 
 
   0.454
SDJ42702.1
Glucose/galactose transporter.
       0.453
SDJ90815.1
Asparaginase.
  
    0.443
cutC
Copper homeostasis protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
       0.409
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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