STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cutCCopper homeostasis protein; Participates in the control of copper homeostasis. Belongs to the CutC family. (240 aa)    
Predicted Functional Partners:
SDJ90815.1
Asparaginase.
 
     0.716
SDJ42702.1
Glucose/galactose transporter.
       0.686
SDJ42670.1
Predicted neuraminidase (sialidase).
       0.603
SDJ90840.1
Hexosaminidase.
 
     0.527
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
    0.522
SDJ42925.1
Glucosamine-6-phosphate deaminase.
 
   
 0.520
SDI96572.1
Glucosamine-6-phosphate deaminase.
 
   
 0.513
SDJ27531.1
Glucosamine-6-phosphate deaminase.
 
   
 0.509
SDJ42631.1
L-rhamnose mutarotase.
       0.505
SDJ42833.1
Susd and RagB outer membrane lipoprotein.
       0.488
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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