Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rprYDNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (236 aa)    
Predicted Functional Partners:
SDJ44678.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
 
  0.983
SDJ94765.1
PAS domain S-box-containing protein.
 
 0.962
SDI48782.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
0.955
SDJ11966.1
PAS domain S-box-containing protein.
 
0.943
phoR
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
  
  0.910
SDI75168.1
Signal transduction histidine kinase.
 
 0.897
SDI89621.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
  0.875
SDI74682.1
Signal transduction histidine kinase.
 
0.873
SDJ95646.1
PAS domain S-box-containing protein.
 
0.859
SDJ94597.1
PAS domain S-box-containing protein.
 
  0.849
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.