STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ47403.1Beta-glucosidase. (532 aa)    
Predicted Functional Partners:
SDJ89050.1
CubicO group peptidase, beta-lactamase class C family.
 
 
  0.840
SDJ90762.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
   
 
  0.773
SDJ47365.1
KilA-N domain-containing protein.
       0.678
SDJ08385.1
CubicO group peptidase, beta-lactamase class C family.
 
 
  0.675
SDJ47326.1
MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG.
 
     0.635
SDJ47280.1
Uncharacterized lipoprotein YddW, UPF0748 family.
 
     0.624
ddpX
D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
 
   
  0.559
SDJ47439.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
       0.488
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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