STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ47773.1Type IX secretion system membrane protein, PorP/SprF family. (304 aa)    
Predicted Functional Partners:
SDJ47740.1
Outer membrane protein OmpA.
 
     0.941
SDJ47809.1
Gliding motility-associated C-terminal domain-containing protein.
 
     0.823
SDJ92579.1
WD40-like Beta Propeller Repeat.
  
     0.770
SDJ40003.1
WD40-like Beta Propeller Repeat.
  
     0.753
SDJ01193.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.736
SDJ92653.1
Conserved repeat domain-containing protein/gliding motility-associated C-terminal domain-containing protein.
  
     0.723
SDI71119.1
Protein involved in gliding motility SprE.
  
   
 0.687
SDI89418.1
Hypothetical protein.
  
     0.676
gldD
Protein involved in gliding motility GldD.
  
     0.641
SDJ58147.1
Protein involved in gliding motility GldJ.
 
     0.640
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.