STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ47809.1Gliding motility-associated C-terminal domain-containing protein. (896 aa)    
Predicted Functional Partners:
SDJ47773.1
Type IX secretion system membrane protein, PorP/SprF family.
 
     0.823
SDJ47740.1
Outer membrane protein OmpA.
 
 
   0.779
SDJ92579.1
WD40-like Beta Propeller Repeat.
  
  0.630
SDJ92622.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.558
SDJ01193.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.540
SDI55544.1
Hypothetical protein.
  
  0.536
SDJ40003.1
WD40-like Beta Propeller Repeat.
  
 
   0.456
SDJ10005.1
Outer membrane receptor proteins, mostly Fe transport.
  
 
   0.410
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.