STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ51120.1Hypothetical protein; Partial gene; manually curated. (674 aa)    
Predicted Functional Partners:
SDJ45532.1
Hypothetical protein.
  
     0.579
SDI74121.1
Hypothetical protein.
  
     0.557
SDI65743.1
Hypothetical protein.
  
     0.513
SDJ52418.1
Exostosin family protein.
  
     0.480
SDK06680.1
Por secretion system C-terminal sorting domain-containing protein; Belongs to the peptidase S8 family.
  
 
   0.456
SDI90991.1
WYL domain-containing protein.
  
     0.449
SDJ56703.1
Tetratricopeptide repeat-containing protein.
  
     0.435
SDI50200.1
CarboxypepD_reg-like domain-containing protein.
  
 
   0.422
SDJ02796.1
Hypothetical protein.
  
   0.416
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.