Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ygcM6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. (136 aa)    
Predicted Functional Partners:
queE
Organic radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
 
 
 0.971
folE2
GTP cyclohydrolase I.
  
 
 0.869
SDI80376.1
6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase.
  
  
 
0.863
SDJ51628.1
Peroxiredoxin Q/BCP.
  
    0.818
idi
Isopentenyl-diphosphate delta-isomerase.
       0.813
SDJ65996.1
Hypothetical protein.
  
  
 0.807
folE
GTP cyclohydrolase I.
  
 
 0.671
manA
Mannose-6-phosphate isomerase, type 1.
       0.647
SDJ51545.1
Hypothetical protein.
       0.557
hisIE
phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family.
     
 0.473
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
Server load: low (22%) [HD]