STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ52667.1UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase. (467 aa)    
Predicted Functional Partners:
SDJ52304.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
  0.856
SDJ52490.1
Glycosyltransferase, GT2 family.
 
     0.843
SDJ52376.1
Glycosyltransferase, GT2 family.
 
     0.841
SDJ52524.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
  0.839
SDJ52418.1
Exostosin family protein.
 
  
  0.834
SDJ52949.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
  0.832
SDJ52263.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
  0.828
SDJ52738.1
N-acetylneuraminate synthase.
 
     0.827
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
  
 
 0.783
SDJ52807.1
N-acylneuraminate cytidylyltransferase.
 
     0.783
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.