STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ52774.1Very-short-patch-repair endonuclease. (135 aa)    
Predicted Functional Partners:
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.678
gltA
Glutamate synthase (NADH) large subunit.
   
    0.631
SDJ52807.1
N-acylneuraminate cytidylyltransferase.
       0.526
thrA
Aspartate kinase.
    
  0.495
SDI49940.1
Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family.
    
  0.495
SDJ52738.1
N-acetylneuraminate synthase.
       0.473
metF
5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family.
    
  0.418
SDJ52840.1
Hypothetical protein.
       0.418
SDJ52984.1
Glycosyltransferase, GT2 family.
 
     0.418
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.