Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SDJ52840.1Hypothetical protein. (296 aa)    
Predicted Functional Partners:
SDJ52907.1
Glycosyltransferase, GT2 family.
 
     0.926
SDJ52949.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.907
SDJ52807.1
N-acylneuraminate cytidylyltransferase.
 
     0.782
SDJ52418.1
Exostosin family protein.
 
     0.774
SDJ52876.1
D-alanyl-lipoteichoic acid acyltransferase DltB, MBOAT superfamily; Belongs to the membrane-bound acyltransferase family.
 
  
  0.767
SDJ52667.1
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase.
 
     0.643
SDJ52984.1
Glycosyltransferase, GT2 family.
       0.591
SDJ52738.1
N-acetylneuraminate synthase.
 
  
  0.576
SDJ53019.1
Glycosyltransferase, GT2 family.
       0.560
SDJ53067.1
Hypothetical protein.
       0.555
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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