STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ53720.1Capsular exopolysaccharide family. (783 aa)    
Predicted Functional Partners:
SDI69646.1
Uncharacterised nucleotidyltransferase.
  
 0.999
SDJ53760.1
Polysaccharide export outer membrane protein.
 
 0.999
wza
Protein involved in gliding motility EpsA.
 
 0.999
SDJ52188.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
 
 0.998
SDJ53881.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
 
 0.976
SDJ53520.1
Polysaccharide biosynthesis protein; NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
 
 0.921
SDJ53483.1
Tyrosine-protein phosphatase YwqE.
  
 0.889
SDJ53838.1
Acetyltransferase EpsM.
  
 
 0.788
wzc
Protein involved in gliding motility EpsB.
 
 
0.781
nuoC
NADH dehydrogenase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.
     
 0.774
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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