STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ53838.1Acetyltransferase EpsM. (213 aa)    
Predicted Functional Partners:
SDJ53881.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
 0.993
SDJ53797.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.908
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.841
SDJ53919.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.840
rfaG
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.823
thrA
Aspartate kinase.
    
 0.809
SDI49940.1
Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family.
    
 0.809
SDJ53720.1
Capsular exopolysaccharide family.
  
 
 0.788
SDJ53520.1
Polysaccharide biosynthesis protein; NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
 
  0.785
SDJ54034.1
EpsG family protein.
       0.781
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.