Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SDJ53881.1Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). (200 aa)    
Predicted Functional Partners:
SDJ53838.1
Acetyltransferase EpsM.
 
 0.993
SDJ53720.1
Capsular exopolysaccharide family.
 
 
 0.979
wzc
Protein involved in gliding motility EpsB.
 
 
 0.957
SDJ53797.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.953
SDJ53919.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  0.949
SDJ54034.1
EpsG family protein.
 
  
 0.928
SDJ54206.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.883
rfaG
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.864
ycbI
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.851
SDJ54070.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.847
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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