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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ53881.1Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). (200 aa)    
Predicted Functional Partners:
SDJ53838.1
Acetyltransferase EpsM.
 
 0.993
SDJ53720.1
Capsular exopolysaccharide family.
 
 
 0.976
wzc
Protein involved in gliding motility EpsB.
 
 
 0.950
SDJ53919.1
Glycosyltransferase involved in cell wall bisynthesis.
    0.946
SDJ53797.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.942
SDJ54034.1
EpsG family protein.
 
  
 0.908
SDJ54206.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.874
rfaG
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.853
ycbI
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.850
SDJ54070.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.835
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.