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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ54171.1Acyltransferase family protein. (343 aa)    
Predicted Functional Partners:
SDJ53881.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
     
 0.781
SDJ54034.1
EpsG family protein.
       0.780
SDJ53838.1
Acetyltransferase EpsM.
  
    0.778
SDJ53919.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.774
rfaG
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.774
SDJ54070.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.774
SDJ54101.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.774
SDJ54206.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.774
ycbI
Glycosyltransferase involved in cell wall bisynthesis.
       0.773
SDJ54136.1
Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains.
       0.773
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.