STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ54551.1Mannose-1-phosphate guanylyltransferase. (335 aa)    
Predicted Functional Partners:
gmd
GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
 
 0.949
SDJ44278.1
Phosphomannomutase.
 
 
 0.933
SDJ52188.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.929
ugd
UDPglucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
 0.760
manA
Mannose-6-phosphate isomerase, type 1.
 
 
 0.696
wzc
Protein involved in gliding motility EpsB.
  
 
 0.693
SDI70647.1
dTDP-glucose 4,6-dehydratase.
  
 
 0.673
SDJ53720.1
Capsular exopolysaccharide family.
  
 
 0.655
SDJ53881.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
 
 0.618
SDJ54514.1
ATP-binding cassette, subfamily B, MsbA.
       0.613
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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