STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ57667.1Biopolymer transport protein ExbD. (131 aa)    
Predicted Functional Partners:
SDJ57702.1
Biopolymer transport protein ExbB.
 
 
 0.988
exbB
Outer membrane transport energization protein ExbB.
 
 
 0.848
SDJ57631.1
Outer membrane transport energization protein TonB.
 
   0.847
tonB
Outer membrane transport energization protein TonB.
  
   0.837
SDJ71152.1
Protein TonB.
  
   0.752
SDI95449.1
Hypothetical protein.
  
   0.737
SDI95413.1
TonB protein C-terminal.
  
   0.714
SDJ57738.1
Dihydrofolate synthase / folylpolyglutamate synthase.
     
 0.675
SDJ04752.1
Tetratricopeptide repeat-containing protein.
 
  
 0.663
SDI83744.1
Hypothetical protein.
  
   0.653
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.