STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ58673.12,4-dienoyl-CoA reductase. (368 aa)    
Predicted Functional Partners:
SDI50265.1
Electron transfer flavoprotein beta subunit.
 
 
 0.776
gltA
Glutamate synthase (NADH) large subunit.
    
 0.740
SDJ58631.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; Manually curated.
       0.625
etfA
Electron transfer flavoprotein alpha subunit apoprotein.
 
 
 
 0.577
nfnB
Nitroreductase / dihydropteridine reductase.
  
 
  0.577
SDJ58612.1
Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.478
SDJ58580.1
Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.466
SDK02207.1
3-hydroxyacyl-CoA dehydrogenase.
  
  
 0.464
SDJ74351.1
Nitroreductase.
 
 
  0.423
menE
O-succinylbenzoic acid--CoA ligase.
     
 0.404
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
Server load: low (18%) [HD]