STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ63373.1Hypothetical protein. (103 aa)    
Predicted Functional Partners:
SDJ63344.1
Hypothetical protein.
 
     0.780
SDJ71525.1
Iron complex transport system substrate-binding protein.
  
     0.636
SDI66781.1
Protein of unknown function.
  
     0.613
SDJ05310.1
Protein of unknown function.
  
     0.553
SDI78807.1
ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains).
  
     0.530
SDI88574.1
Hypothetical protein.
  
     0.499
SDJ92366.1
Hypothetical protein.
  
     0.469
SDI50632.1
Surface antigen.
  
     0.440
SDJ63305.1
Hypothetical protein.
       0.434
SDI56691.1
Hypothetical protein.
  
     0.425
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.