STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ63642.1Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. (474 aa)    
Predicted Functional Partners:
SDJ63677.1
Phosphoglycerol transferase MdoB.
     0.986
SDJ63614.1
Hypothetical protein.
 
     0.956
SDJ63725.1
Outer membrane protein, YaiO family.
 
    0.932
SDJ63585.1
Response regulator receiver domain-containing protein.
 
     0.818
SDI86197.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
 
 
 
 0.554
SDI62950.1
Signal transduction histidine kinase.
 
 
 0.480
SDI49223.1
Polysaccharide deacetylase.
   
 
  0.464
SDI71792.1
Polysaccharide deacetylase.
   
 
  0.464
rhlE
ATP-dependent RNA helicase RhlE.
   
   0.446
SDI99008.1
Tetratricopeptide repeat-containing protein.
  
 
 0.434
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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