STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ64234.1Enterochelin esterase. (297 aa)    
Predicted Functional Partners:
SDJ64363.1
Protein of unknown function.
     0.946
xynA
Endo-1,4-beta-xylanase.
 
 
   0.826
SDJ64265.1
Enterochelin esterase.
 
    
0.735
SDJ64199.1
Enterochelin esterase.
 
    
0.704
SDJ64295.1
Enterochelin esterase.
 
    
0.665
SDJ64325.1
Oligosaccharide reducing-end xylanase.
 
     0.665
SDJ64759.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.663
SDJ64163.1
Oxidoreductase family, NAD-binding Rossmann fold.
 
     0.560
xylB
alpha-N-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.559
SDJ64134.1
Protein of unknown function.
    
  0.515
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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