STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ70703.1Hypothetical protein. (204 aa)    
Predicted Functional Partners:
SDJ70743.1
Transcriptional regulator.
 
     0.955
SDJ70780.1
Protein of unknown function.
 
     0.833
SDI48675.1
Protein of unknown function.
  
     0.574
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 
 0.562
SDI48744.1
Transglutaminase-like superfamily protein.
  
     0.555
SDI48707.1
Protein of unknown function.
  
     0.552
SDJ75053.1
Putative ABC transport system ATP-binding protein.
  
 
 0.520
SDJ66632.1
HD domain-containing protein.
  
     0.497
SDJ70656.1
Signal transduction histidine kinase.
       0.476
SDJ66665.1
Calcineurin-like phosphoesterase.
  
     0.456
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.