STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ72650.1FixH protein. (151 aa)    
Predicted Functional Partners:
ccoN
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.999
ccoG
Cytochrome c oxidase accessory protein FixG.
 
  
 0.949
ccoP
Cytochrome c oxidase cbb3-type subunit 3.
 
   0.935
SDJ72680.1
Hypothetical protein.
 
     0.911
ccoQ
Hypothetical protein.
 
   0.891
ccoS
Cytochrome oxidase maturation protein, cbb3-type.
 
  
 0.868
SDJ72446.1
Cu+-exporting ATPase.
 
   
 0.850
hemN
Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
    0.606
SDI87106.1
Quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit.
  
   0.577
actE
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit.
  
   0.558
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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