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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ75053.1Putative ABC transport system ATP-binding protein. (229 aa)    
Predicted Functional Partners:
SDI50776.1
Putative ABC transport system permease protein.
 0.996
SDJ03457.1
Putative ABC transport system permease protein.
 0.996
SDI78732.1
Lipoprotein-releasing system permease protein.
  
 0.953
SDJ47632.1
Outer membrane lipoprotein carrier protein LolA.
   
 
 0.834
SDI88772.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.833
SDJ75013.1
cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
       0.617
SDJ94765.1
PAS domain S-box-containing protein.
 
 0.614
SDI88737.1
Outer membrane protein.
 
 
   0.567
SDJ75092.1
Methyltransferase domain-containing protein.
       0.555
SDJ70703.1
Hypothetical protein.
  
 
 0.520
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.