STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgB1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (634 aa)    
Predicted Functional Partners:
glgA
Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 0.997
SDI62049.1
Starch synthase.
 
 
 0.987
glgC
Glucose-1-phosphate adenylyltransferase.
 
 
 0.982
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 0.893
remC
Protein involved in gliding motility RemC.
   
  0.547
SDJ52263.1
Glycosyltransferase involved in cell wall bisynthesis.
   
  0.547
SDJ52524.1
Glycosyltransferase involved in cell wall bisynthesis.
   
  0.547
SDJ53919.1
Glycosyltransferase involved in cell wall bisynthesis.
   
  0.547
rfaG
Glycosyltransferase involved in cell wall bisynthesis.
   
  0.547
SDJ54070.1
Glycosyltransferase involved in cell wall bisynthesis.
   
  0.547
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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