STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ78966.1Chemotaxis protein MotB. (276 aa)    
Predicted Functional Partners:
SDI63427.1
Chemotaxis protein MotB.
  
  
 
0.902
SDK06908.1
Antitoxin component YwqK of the YwqJK toxin-antitoxin module.
    
   0.812
cheB2
CheB methylesterase.
 
  
 0.734
SDJ99940.1
Thrombospondin type 3 repeat-containing protein.
  
  0.716
SDJ05245.1
Chemotaxis protein methyltransferase CheR.
 
  
 0.691
SDI78845.1
Thrombospondin type 3 repeat-containing protein.
  
  0.676
SDI48782.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
  
 0.661
SDJ79012.1
Hypothetical protein.
       0.654
SDJ79050.1
Type I restriction enzyme R protein N terminus (HSDR_N).
 
     0.654
SDJ94765.1
PAS domain S-box-containing protein.
  
 
 0.644
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.