STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ81721.1Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. (368 aa)    
Predicted Functional Partners:
SDJ81674.1
Glutathione synthase/RimK-type ligase, ATP-grasp superfamily.
 
  
 0.964
SDI71762.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
   
  0.945
SDJ81803.1
Hypothetical protein.
 
  
  0.908
SDJ81764.1
GMP synthase-Glutamine amidotransferase.
 
     0.904
SDJ81629.1
Esterase/lipase superfamily enzyme.
 
     0.854
pepA
Leucyl aminopeptidase; Belongs to the peptidase M17 family.
  
  
  0.737
SDJ81993.1
ATP-grasp domain-containing protein.
 
     0.722
pruA
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.674
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
     
 0.670
SDJ82084.1
Predicted hydrolase of the alpha/beta superfamily.
  
     0.617
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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