STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ88783.1N-acetylmuramoyl-L-alanine amidase. (389 aa)    
Predicted Functional Partners:
mltD
Membrane-bound lytic murein transglycosylase D.
 
  
 0.830
SDJ47632.1
Outer membrane lipoprotein carrier protein LolA.
    
   0.726
SDJ88833.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
     0.726
SDI99738.1
Flagellum-specific peptidoglycan hydrolase FlgJ.
  
 
 0.702
mrcA
Penicillin-binding protein 1A.
  
 
 0.690
SDJ88881.1
4Fe-4S dicluster domain-containing protein.
       0.670
SDJ88744.1
N-acetylmuramoyl-L-alanine amidase.
 
    
0.643
SDI71665.1
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB.
 
  
 0.640
SDK06280.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
 0.640
SDI65562.1
Cell division protein DedD (protein involved in septation).
   
 0.608
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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