STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ89005.1Hypothetical protein. (160 aa)    
Predicted Functional Partners:
SDJ89050.1
CubicO group peptidase, beta-lactamase class C family.
       0.777
SDJ88921.1
Cysteine-rich domain-containing protein.
       0.747
SDI73974.1
Protein of unknown function.
  
     0.743
gldC
Protein involved in gliding motility GldC.
  
     0.742
SDI75908.1
Hypothetical protein.
  
     0.733
SDJ88962.1
Membrane-associated phospholipid phosphatase.
       0.686
SDJ88881.1
4Fe-4S dicluster domain-containing protein.
 
     0.685
SDJ26538.1
Protein of unknown function.
  
     0.681
SDJ63212.1
Acyl-CoA reductase (LuxC).
  
     0.625
SDJ89091.1
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA.
 
     0.616
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.