STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ90727.1Carbohydrate family 9 binding domain-like. (355 aa)    
Predicted Functional Partners:
SDJ90788.1
Glycosyl hydrolase-like 10.
 
     0.920
SDJ90697.1
Beta-1,4-mannooligosaccharide/beta-1, 4-mannosyl-N-acetylglucosamine phosphorylase.
 
     0.902
SDJ90658.1
Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.873
SDJ90762.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
     0.714
SDJ90624.1
Alpha-1,2-mannosidase, putative.
 
     0.707
SDJ90945.1
Alpha-1,2-mannosidase, putative.
 
     0.667
SDJ90815.1
Asparaginase.
 
     0.641
SDJ90590.1
Histidine kinase.
 
     0.636
SDJ90910.1
alpha-L-fucosidase.
 
     0.629
SDJ90840.1
Hexosaminidase.
 
     0.531
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.