STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ90762.1Chitinase; Belongs to the glycosyl hydrolase 18 family. (374 aa)    
Predicted Functional Partners:
SDJ90840.1
Hexosaminidase.
 
  
 0.907
SDI61295.1
Por secretion system C-terminal sorting domain-containing protein.
   
 0.870
SDJ92116.1
Hexosaminidase.
 
  
 0.817
SDJ90815.1
Asparaginase.
 
  
  0.788
SDJ47403.1
Beta-glucosidase.
   
 
  0.773
SDJ04428.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
 
      0.768
ctaC
Cytochrome c oxidase subunit 2.
    
 0.766
SDJ90727.1
Carbohydrate family 9 binding domain-like.
 
     0.714
SDJ89050.1
CubicO group peptidase, beta-lactamase class C family.
   
 
 0.709
SDJ90788.1
Glycosyl hydrolase-like 10.
       0.690
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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