STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ95152.1Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. (533 aa)    
Predicted Functional Partners:
SDI60492.1
Hypothetical protein.
  
     0.752
SDI53060.1
Fasciclin domain-containing protein.
  
     0.720
SDI52729.1
Starch-binding associating with outer membrane.
  
     0.719
SDI52905.1
Uncaracterized surface protein containing fasciclin (FAS1) repeats.
  
     0.716
SDI60919.1
Protein of unknown function.
  
     0.702
SDI52852.1
Uncaracterized surface protein containing fasciclin (FAS1) repeats.
  
     0.700
SDI52963.1
Starch-binding associating with outer membrane.
  
     0.687
SDI52805.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.666
SDI60690.1
Protein of unknown function.
  
     0.664
SDI53006.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.662
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.