STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmpDBacitracin ABC transporter ATP-binding protein; Bicarbonate transport system ATP-binding protein/nitrate/nitrite transport system ATP-binding protein. (268 aa)    
Predicted Functional Partners:
SDJ95732.1
Nitrate/nitrite transport system permease protein.
 
 
 0.990
SDJ95771.1
Nitrate/nitrite transport system substrate-binding protein.
 
 0.989
SDJ09647.1
Nitrate/nitrite transport system substrate-binding protein.
 
 0.982
SDJ12064.1
ABC-2 type transport system ATP-binding protein.
 
  
 
0.875
SDJ95810.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.852
SDJ79509.1
NMT1/THI5 like.
  
 
 0.738
SDI50776.1
Putative ABC transport system permease protein.
 
      0.719
SDJ12097.1
ABC-type multidrug transport system, ATPase component.
 
  
 
0.676
yvbT
Luciferase family oxidoreductase, group 1.
  
 
 0.671
SDJ03457.1
Putative ABC transport system permease protein.
 
      0.603
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.