STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ95810.1Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (1174 aa)    
Predicted Functional Partners:
SDJ95849.1
Rubredoxin.
 
 0.998
nirD-2
Nitrite reductase (NADH) small subunit.
 0.996
nuoG
NADH dehydrogenase subunit G.
   
 0.953
SDI85106.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
  
 0.944
gcvP
Glycine dehydrogenase; Belongs to the GcvP family.
   
 
 0.925
nuoF
NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
  
 0.924
SDJ11338.1
Nitrite reductase (NADH) large subunit.
 
 
0.924
SDJ05549.1
MFS transporter, NNP family, nitrate/nitrite transporter.
 
 
 0.920
SDJ00563.1
Dissimilatory nitrite reductase (NO-forming), copper type apoprotein.
    
 0.918
nuoE
NADH dehydrogenase subunit E.
  
 0.904
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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