STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK00797.1Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family. (433 aa)    
Predicted Functional Partners:
SDK00839.1
DNA-binding transcriptional regulator, AcrR family.
 
     0.960
SDK00679.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
 
   0.769
phrB2
Deoxyribodipyrimidine photo-lyase family protein (cryptochrome); Belongs to the DNA photolyase family.
 
     0.728
SDK00585.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
 
 
 0.685
SDK00718.1
TIGR03643 family protein.
 
     0.666
SDK00877.1
Hypothetical protein.
       0.577
SDJ95527.1
Anti-sigma-K factor RskA.
  
     0.557
SDJ52225.1
O-Antigen ligase.
  
 
 0.539
hemB
Porphobilinogen synthase; Belongs to the ALAD family.
    
 0.489
SDI48115.1
Methyltransferase domain-containing protein.
  
 
 0.481
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.