STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK00877.1Hypothetical protein. (304 aa)    
Predicted Functional Partners:
SDK00500.1
Ligand-binding SRPBCC domain-containing protein.
      0.901
SDK00585.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
 
    0.814
SDK00797.1
Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family.
       0.577
SDK00839.1
DNA-binding transcriptional regulator, AcrR family.
       0.542
SDI59915.1
Hypothetical protein.
  
    0.525
SDI76171.1
NADP-dependent alcohol dehydrogenase.
   
    0.508
phrB2
Deoxyribodipyrimidine photo-lyase family protein (cryptochrome); Belongs to the DNA photolyase family.
 
    0.494
SDJ89434.1
Hypothetical protein.
   
    0.493
SDI92025.1
Hypothetical protein.
  
    0.480
sirR
Iron (metal) dependent repressor, DtxR family.
   
    0.437
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.