close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK01573.1Signal transduction histidine kinase. (557 aa)    
Predicted Functional Partners:
SDK01610.1
Two component transcriptional regulator, LuxR family.
 
  0.953
nreC
Two component transcriptional regulator, LuxR family.
  
  0.883
SDI75128.1
Two component transcriptional regulator, LuxR family.
  
  0.882
SDI93507.1
Two component transcriptional regulator, LuxR family.
  
  0.882
SDJ11195.1
Two component transcriptional regulator, LuxR family.
  
  0.881
SDI78382.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.820
SDJ11966.1
PAS domain S-box-containing protein.
 0.761
SDI48782.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
 
 0.722
SDJ95646.1
PAS domain S-box-containing protein.
 
 0.710
SDJ94765.1
PAS domain S-box-containing protein.
   
 0.665
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.