STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK03110.1Hypothetical protein. (146 aa)    
Predicted Functional Partners:
SDK03152.1
Protein of unknown function.
 
     0.861
SDJ65615.1
Protein of unknown function.
  
     0.754
SDI88574.1
Hypothetical protein.
  
     0.732
SDI82211.1
Protein of unknown function.
  
     0.714
SDJ62574.1
Hypothetical protein.
  
     0.709
SDI70062.1
Hypothetical protein.
  
     0.697
SDI70816.1
Hypothetical protein.
  
     0.688
SDI70097.1
YtxH-like protein.
  
     0.678
SDI70841.1
Hypothetical protein.
  
     0.675
SDK08318.1
Hypothetical protein.
  
     0.659
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.