STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK06680.1Por secretion system C-terminal sorting domain-containing protein; Belongs to the peptidase S8 family. (539 aa)    
Predicted Functional Partners:
SDK06725.1
Enoyl-[acyl-carrier protein] reductase II.
       0.821
SDK06769.1
Hypothetical protein.
       0.737
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
       0.658
SDK06585.1
Antitoxin component YwqK of the YwqJK toxin-antitoxin module.
 
     0.595
SDI61498.1
Hypothetical protein.
  
 
   0.489
SDK06280.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
    
 0.472
SDI61466.1
Hypothetical protein.
  
 
   0.469
SDI80007.1
Por secretion system C-terminal sorting domain-containing protein.
  
    0.467
SDK02618.1
Hypothetical protein.
  
 
   0.467
SDI72725.1
RagB/SusD domain-containing protein.
  
 
   0.459
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.